IL_7Q08_150

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UA*UCA

Length

5 nucleotides

Bulged bases

7Q08|1|4|C|91

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_150 not in the Motif Atlas

Geometric match to IL_5TBW_002

Geometric discrepancy: 0.3086

The information below is about IL_5TBW_002

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

40

Unit IDs

7Q08|1|4|U|67
7Q08|1|4|A|68
*
7Q08|1|4|U|90
7Q08|1|4|C|91
7Q08|1|4|A|92

Current chains

Chain 4

5.8S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 9

Ribosomal 60S subunit protein L26B

Chain AI

Ribosomal 60S subunit protein L35A

Chain AK

Ribosomal protein L37