IL_7Q08_230
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UUG*UA
- Length
- 5 nucleotides
- Bulged bases
- 7Q08|1|A|U|1644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_230 not in the Motif Atlas
- Geometric match to IL_4V88_469
- Geometric discrepancy: 0.1408
- The information below is about IL_4V88_469
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7Q08|1|A|U|1643
7Q08|1|A|U|1644
7Q08|1|A|G|1645
*
7Q08|1|A|U|1730
7Q08|1|A|A|1731
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 6
- Ribosomal 60S subunit protein L23B
- Chain AO
- 60S ribosomal protein eL41
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: