IL_7Q0P_039
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0P_039 not in the Motif Atlas
- Geometric match to IL_5TBW_038
- Geometric discrepancy: 0.0609
- The information below is about IL_5TBW_038
- Detailed Annotation
- 7x7 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93830.3
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7Q0P|1|1|G|987
7Q0P|1|1|A|988
7Q0P|1|1|G|989
7Q0P|1|1|G|990
7Q0P|1|1|U|991
7Q0P|1|1|A|992
7Q0P|1|1|A|993
*
7Q0P|1|1|U|1048
7Q0P|1|1|A|1049
7Q0P|1|1|A|1050
7Q0P|1|1|A|1051
7Q0P|1|1|U|1052
7Q0P|1|1|A|1053
7Q0P|1|1|U|1054
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain o
- Ribosomal 60S subunit protein L7A
- Chain r
- Ribosomal 60S subunit protein L10
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