3D structure

PDB id
7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Candida albicans 80S ribosome in complex with anisomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
UUAUCA*UCUUAUG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Q0P_076 not in the Motif Atlas
Homologous match to IL_8C3A_078
Geometric discrepancy: 0.0587
The information below is about IL_8C3A_078
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_39753.2
Basepair signature
cWW-L-R-tWH-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

7Q0P|1|1|U|1698
7Q0P|1|1|U|1699
7Q0P|1|1|A|1700
7Q0P|1|1|U|1701
7Q0P|1|1|C|1702
7Q0P|1|1|A|1703
*
7Q0P|1|1|U|1733
7Q0P|1|1|C|1734
7Q0P|1|1|U|1735
7Q0P|1|1|U|1736
7Q0P|1|1|A|1737
7Q0P|1|1|U|1738
7Q0P|1|1|G|1739

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain AH
Ribosomal 60S subunit protein L34B
Chain AQ
Ribosomal 60S subunit protein L43A

Coloring options:


Copyright 2026 BGSU RNA group. Page generated in 0.0883 s