IL_7Q0R_122
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CUUAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0R_122 not in the Motif Atlas
- Homologous match to IL_8C3A_125
- Geometric discrepancy: 0.0612
- The information below is about IL_8C3A_125
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7Q0R|1|1|C|2990
7Q0R|1|1|U|2991
7Q0R|1|1|U|2992
7Q0R|1|1|A|2993
7Q0R|1|1|G|2994
7Q0R|1|1|U|2995
7Q0R|1|1|A|2996
7Q0R|1|1|C|2997
*
7Q0R|1|1|G|3002
7Q0R|1|1|G|3003
7Q0R|1|1|A|3004
7Q0R|1|1|A|3005
7Q0R|1|1|C|3006
7Q0R|1|1|C|3007
7Q0R|1|1|G|3008
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Ribosomal 60S subunit protein L23B
- Chain AN
- Rpl40bp
- Chain k
- 60S ribosomal protein L3
- Chain q
- Ribosomal 60S subunit protein L9B
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