IL_7Q4K_107

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

7Q4K|1|BA|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q4K_107 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.2925

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7Q4K|1|BA|G|1059
7Q4K|1|BA|U|1060
7Q4K|1|BA|U|1061
7Q4K|1|BA|G|1062
*
7Q4K|1|BA|C|1076
7Q4K|1|BA|A|1077
7Q4K|1|BA|U|1078
7Q4K|1|BA|C|1079

Current chains

Chain BA

23S rRNA

Nearby chains