IL_7QCA_019
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7QCA|1|L50|G|659, 7QCA|1|L50|A|671, 7QCA|1|L50|A|672
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QCA_019 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0851
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7QCA|1|L50|G|658
7QCA|1|L50|G|659
7QCA|1|L50|G|660
*
7QCA|1|L50|C|670
7QCA|1|L50|A|671
7QCA|1|L50|A|672
7QCA|1|L50|U|673
7QCA|1|L50|C|674
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LA0
- 60S ribosomal protein L8
- Chain LJJ
- eL37 LJJ
- Chain LN0
- Ribosomal protein L15
- Chain LP0
- 60S ribosomal protein L17
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