IL_7QCA_165
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UGGAAUU*AUGAGUAA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QCA_165 not in the Motif Atlas
- Geometric match to IL_8VTW_006
- Geometric discrepancy: 0.1319
- The information below is about IL_8VTW_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7QCA|1|L50|U|124
7QCA|1|L50|G|125
7QCA|1|L50|G|126
7QCA|1|L50|A|127
7QCA|1|L50|A|128
7QCA|1|L50|U|129
7QCA|1|L50|U|130
*
7QCA|1|L50|A|137
7QCA|1|L50|U|138
7QCA|1|L50|G|139
7QCA|1|L50|A|140
7QCA|1|L50|G|141
7QCA|1|L50|U|142
7QCA|1|L50|A|143
7QCA|1|L50|A|144
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LAA
- uL15 LAA
- Chain LJJ
- eL37 LJJ
- Chain LL0
- 60S ribosomal protein L13
- Chain LN0
- Ribosomal protein L15
- Chain LOO
- 60S ribosomal protein L44
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