IL_7QG8_105

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

7QG8|1|N|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QG8_105 not in the Motif Atlas

Homologous match to IL_5J7L_284

Geometric discrepancy: 0.172

The information below is about IL_5J7L_284

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

7QG8|1|N|C|1043
7QG8|1|N|C|1044
7QG8|1|N|C|1045
7QG8|1|N|A|1046
7QG8|1|N|G|1047
7QG8|1|N|A|1048
7QG8|1|N|C|1049
7QG8|1|N|A|1050
7QG8|1|N|G|1051
*
7QG8|1|N|U|1108
7QG8|1|N|C|1109
7QG8|1|N|G|1110
7QG8|1|N|A|1111
7QG8|1|N|G|1112

Current chains

Chain N

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L6