3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
UAAG*UGAUG
Length
9 nucleotides
Bulged bases
7QG8|1|N|U|1523
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QG8_121 not in the Motif Atlas
Homologous match to IL_5J7L_299
Geometric discrepancy: 0.0859
The information below is about IL_5J7L_299
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68574.4
Basepair signature
cWW-tHH-tHS-cWW
Number of instances in this motif group
3

Unit IDs

7QG8|1|N|U|1468
7QG8|1|N|A|1469
7QG8|1|N|A|1470
7QG8|1|N|G|1471
*
7QG8|1|N|U|1520
7QG8|1|N|G|1521
7QG8|1|N|A|1522
7QG8|1|N|U|1523
7QG8|1|N|G|1524

Current chains

Chain N
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1721 s