IL_7QG8_168

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

7QG8|1|N|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QG8_168 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.0746

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7QG8|1|N|G|2737
7QG8|1|N|A|2738
7QG8|1|N|U|2739
7QG8|1|N|A|2740
7QG8|1|N|A|2741
7QG8|1|N|G|2742
*
7QG8|1|N|C|2762
7QG8|1|N|G|2763
7QG8|1|N|A|2764
7QG8|1|N|A|2765
7QG8|1|N|A|2766
7QG8|1|N|C|2767

Current chains

Chain N

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L6

Chain W

50S ribosomal protein L13

Chain r

50S ribosomal protein L36