IL_7QG8_184

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QG8_184 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0941

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7QG8|1|N|U|1851
7QG8|1|N|U|1852
7QG8|1|N|A|1853
7QG8|1|N|A|1854
7QG8|1|N|U|1855
7QG8|1|N|U|1856
7QG8|1|N|G|1857
7QG8|1|N|A|1858
7QG8|1|N|U|1859
7QG8|1|N|G|1860
*
7QG8|1|N|U|1882
7QG8|1|N|U|1883
7QG8|1|N|G|1884
7QG8|1|N|A|1885
7QG8|1|N|U|1886
7QG8|1|N|C|1887
7QG8|1|N|G|1888
7QG8|1|N|A|1889
7QG8|1|N|A|1890
7QG8|1|N|G|1891

Current chains

Chain N

23S rRNA

Nearby chains