IL_7QGH_012

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7QGH|1|0|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_012 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1207

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7QGH|1|0|G|147
7QGH|1|0|G|148
7QGH|1|0|A|149
7QGH|1|0|U|150
7QGH|1|0|A|151
7QGH|1|0|A|152
7QGH|1|0|C|153
*
7QGH|1|0|G|168
7QGH|1|0|C|169
7QGH|1|0|U|170
7QGH|1|0|A|171
7QGH|1|0|A|172
7QGH|1|0|U|173
7QGH|1|0|A|174
7QGH|1|0|C|175

Current chains

Chain 0

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S20