3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UAGAG*UGGA
Length
9 nucleotides
Bulged bases
7QGH|1|0|A|665
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGH_033 not in the Motif Atlas
Homologous match to IL_5J7L_033
Geometric discrepancy: 0.0621
The information below is about IL_5J7L_033
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_85033.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
35

Unit IDs

7QGH|1|0|U|662
7QGH|1|0|A|663
7QGH|1|0|G|664
7QGH|1|0|A|665
7QGH|1|0|G|666
*
7QGH|1|0|U|740
7QGH|1|0|G|741
7QGH|1|0|G|742
7QGH|1|0|A|743

Current chains

Chain 0
16S rRNA

Nearby chains

Chain 5
30S ribosomal protein S6, non-modified isoform
Chain F
30S ribosomal protein S15
Chain I
30S ribosomal protein S18
Chain s
30S ribosomal protein S21

Coloring options:


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