IL_7QGH_184

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_184 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0941

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7QGH|1|N|U|1851
7QGH|1|N|U|1852
7QGH|1|N|A|1853
7QGH|1|N|A|1854
7QGH|1|N|U|1855
7QGH|1|N|U|1856
7QGH|1|N|G|1857
7QGH|1|N|A|1858
7QGH|1|N|U|1859
7QGH|1|N|G|1860
*
7QGH|1|N|U|1882
7QGH|1|N|U|1883
7QGH|1|N|G|1884
7QGH|1|N|A|1885
7QGH|1|N|U|1886
7QGH|1|N|C|1887
7QGH|1|N|G|1888
7QGH|1|N|A|1889
7QGH|1|N|A|1890
7QGH|1|N|G|1891

Current chains

Chain N

23S rRNA

Nearby chains