IL_7QGR_085

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGR_085 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.0895

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7QGR|1|N|U|703
7QGR|1|N|G|704
7QGR|1|N|A|705
7QGR|1|N|A|706
7QGR|1|N|G|707
*
7QGR|1|N|U|724
7QGR|1|N|G|725
7QGR|1|N|G|726
7QGR|1|N|A|727
7QGR|1|N|G|728

Current chains

Chain N

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L2