3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
GCACUG*CAAAC
Length
11 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGU_030 not in the Motif Atlas
Geometric match to IL_4V9F_035
Geometric discrepancy: 0.2352
The information below is about IL_4V9F_035
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_38603.1
Basepair signature
cWW-cWS-L-R-L-R-R-L-cWW
Number of instances in this motif group
2

Unit IDs

7QGU|1|A|G|911
7QGU|1|A|C|912
7QGU|1|A|A|913
7QGU|1|A|C|914
7QGU|1|A|U|915
7QGU|1|A|G|916
*
7QGU|1|A|C|955
7QGU|1|A|A|956
7QGU|1|A|A|957
7QGU|1|A|A|958
7QGU|1|A|C|959

Current chains

Chain A
23S rRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain M
50S ribosomal protein L16

Coloring options:


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