IL_7QGU_031

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

ACU*GAAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_031 not in the Motif Atlas

Geometric match to IL_7RQB_031

Geometric discrepancy: 0.2703

The information below is about IL_7RQB_031

Detailed Annotation

Minor groove platform with extra cWW

Broad Annotation

Minor groove platform

Motif group

IL_46796.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7QGU|1|A|A|922
7QGU|1|A|C|923
7QGU|1|A|U|924
*
7QGU|1|A|G|946
7QGU|1|A|A|947
7QGU|1|A|A|948
7QGU|1|A|U|949

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16