IL_7QGU_154

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UGA*UACA

Length

7 nucleotides

Bulged bases

7QGU|1|W|A|1403

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_154 not in the Motif Atlas

Geometric match to IL_4KYY_002

Geometric discrepancy: 0.302

The information below is about IL_4KYY_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

7QGU|1|W|U|931
7QGU|1|W|G|932
7QGU|1|W|A|933
*
7QGU|1|W|U|1402
7QGU|1|W|A|1403
7QGU|1|W|C|1404
7QGU|1|W|A|1405

Current chains

Chain W

16S rRNA

Nearby chains

Chain j

30S ribosomal protein S5