IL_7QGU_157

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_157 not in the Motif Atlas

Homologous match to IL_4LFB_038

Geometric discrepancy: 0.1824

The information below is about IL_4LFB_038

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.1

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

58

Unit IDs

7QGU|1|W|G|963
7QGU|1|W|G|964
*
7QGU|1|W|C|1235
7QGU|1|W|A|1236
7QGU|1|W|C|1237

Current chains

Chain W

16S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain r

30S ribosomal protein S13

Chain x

30S ribosomal protein S19

Chain z

Transfer RNA; tRNA