3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
GCAG*CCAAUC
Length
10 nucleotides
Bulged bases
7QGU|1|W|A|1266, 7QGU|1|W|A|1289, 7QGU|1|W|U|1290
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGU_169 not in the Motif Atlas
Homologous match to IL_4LFB_052
Geometric discrepancy: 0.1323
The information below is about IL_4LFB_052
Detailed Annotation
180 degree turn
Broad Annotation
No text annotation
Motif group
IL_08849.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
2

Unit IDs

7QGU|1|W|G|1264
7QGU|1|W|C|1265
7QGU|1|W|A|1266
7QGU|1|W|G|1267
*
7QGU|1|W|C|1286
7QGU|1|W|C|1287
7QGU|1|W|A|1288
7QGU|1|W|A|1289
7QGU|1|W|U|1290
7QGU|1|W|C|1291

Current chains

Chain W
16S rRNA

Nearby chains

Chain h
30S ribosomal protein S3
Chain o
30S ribosomal protein S10
Chain s
30S ribosomal protein S14 type Z

Coloring options:


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