IL_7QI4_071
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GUGCCAG*CGGUCACAC
- Length
- 16 nucleotides
- Bulged bases
- 7QI4|1|AA|C|904, 7QI4|1|AA|C|906
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_071 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1368
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7QI4|1|AA|G|887
7QI4|1|AA|U|888
7QI4|1|AA|G|889
7QI4|1|AA|C|890
7QI4|1|AA|C|891
7QI4|1|AA|A|892
7QI4|1|AA|G|893
*
7QI4|1|AA|C|900
7QI4|1|AA|G|901
7QI4|1|AA|G|902
7QI4|1|AA|U|903
7QI4|1|AA|C|904
7QI4|1|AA|A|905
7QI4|1|AA|C|906
7QI4|1|AA|A|907
7QI4|1|AA|C|908
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain Aw
- A/A-tRNA
- Chain Az
- mRNA
Coloring options: