IL_7QI4_073
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- UUUUA*UGAACA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_073 not in the Motif Atlas
- Geometric match to IL_5TBW_063
- Geometric discrepancy: 0.2726
- The information below is about IL_5TBW_063
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7QI4|1|AA|U|946
7QI4|1|AA|U|947
7QI4|1|AA|U|948
7QI4|1|AA|U|949
7QI4|1|AA|A|950
*
7QI4|1|AA|U|1044
7QI4|1|AA|G|1045
7QI4|1|AA|A|1046
7QI4|1|AA|A|1047
7QI4|1|AA|C|1048
7QI4|1|AA|A|1049
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
Coloring options: