IL_7QIW_024
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CCAAAGC*GAACG
- Length
- 12 nucleotides
- Bulged bases
- 7QIW|1|2|C|523, 7QIW|1|2|A|524
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIW_024 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3553
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
7QIW|1|2|C|522
7QIW|1|2|C|523
7QIW|1|2|A|524
7QIW|1|2|A|525
7QIW|1|2|A|526
7QIW|1|2|G|527
7QIW|1|2|C|528
*
7QIW|1|2|G|551
7QIW|1|2|A|552
7QIW|1|2|A|553
7QIW|1|2|C|554
7QIW|1|2|G|555
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain F
- Ribos_L4_asso_C domain-containing protein
- Chain I
- Thaliana 60S ribosomal protein L7
- Chain O
- Ribosomal_L14e domain-containing protein
- Chain U
- 60S ribosomal protein L18a
Coloring options: