IL_7QIZ_053
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- UUACG*CUACA
- Length
- 10 nucleotides
- Bulged bases
- 7QIZ|1|2|C|1343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_053 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.149
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7QIZ|1|2|U|1178
7QIZ|1|2|U|1179
7QIZ|1|2|A|1180
7QIZ|1|2|C|1181
7QIZ|1|2|G|1182
*
7QIZ|1|2|C|1340
7QIZ|1|2|U|1341
7QIZ|1|2|A|1342
7QIZ|1|2|C|1343
7QIZ|1|2|A|1344
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain I
- Thaliana 60S ribosomal protein L7
- Chain S
- Ribosomal_L18e/L15P domain-containing protein
- Chain g
- 60S ribosomal protein eL32
- Chain h
- 60S ribosomal protein eL33
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