IL_7QIZ_081

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

7QIZ|1|2|G|1756

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QIZ_081 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.0865

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7QIZ|1|2|U|1698
7QIZ|1|2|U|1699
7QIZ|1|2|A|1700
7QIZ|1|2|A|1701
7QIZ|1|2|C|1702
*
7QIZ|1|2|G|1752
7QIZ|1|2|G|1753
7QIZ|1|2|A|1754
7QIZ|1|2|A|1755
7QIZ|1|2|G|1756
7QIZ|1|2|A|1757

Current chains

Chain 2

25S rRNA

Nearby chains

Chain i

60S ribosomal protein eL34

Chain m

60S ribosomal protein L38