IL_7QIZ_118
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CAA*UGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_118 not in the Motif Atlas
- Homologous match to IL_8C3A_108
- Geometric discrepancy: 0.1097
- The information below is about IL_8C3A_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
7QIZ|1|2|C|2670
7QIZ|1|2|A|2671
7QIZ|1|2|A|2672
*
7QIZ|1|2|U|2690
7QIZ|1|2|G|2691
7QIZ|1|2|U|2692
7QIZ|1|2|G|2693
7QIZ|1|2|G|2694
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain G
- Ribosomal_L18_c domain-containing protein
- Chain M
- 60S ribosomal protein uL5
- Chain V
- 60S ribosomal protein eL21
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