IL_7QIZ_166
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GU*ACC
- Length
- 5 nucleotides
- Bulged bases
- 7QIZ|1|8|C|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_166 not in the Motif Atlas
- Geometric match to IL_1DQF_001
- Geometric discrepancy: 0.247
- The information below is about IL_1DQF_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
7QIZ|1|8|G|73
7QIZ|1|8|U|74
*
7QIZ|1|8|A|94
7QIZ|1|8|C|95
7QIZ|1|8|C|96
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- KOW domain-containing protein
- Chain j
- Similar to 60S ribosomal protein L35
- Chain l
- Ribosomal protein L37
- Chain n
- 60S ribosomal protein eL39
Coloring options: