IL_7QIZ_176
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- UAUGAA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 7QIZ|1|S2|U|66, 7QIZ|1|S2|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_176 not in the Motif Atlas
- Geometric match to IL_4V88_390
- Geometric discrepancy: 0.1812
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7QIZ|1|S2|U|64
7QIZ|1|S2|A|65
7QIZ|1|S2|U|66
7QIZ|1|S2|G|67
7QIZ|1|S2|A|68
7QIZ|1|S2|A|69
*
7QIZ|1|S2|U|83
7QIZ|1|S2|G|84
7QIZ|1|S2|A|85
7QIZ|1|S2|A|86
7QIZ|1|S2|A|87
Current chains
- Chain S2
- 18S
Nearby chains
- Chain FA
- 40S ribosomal protein S6
- Chain KA
- 40S ribosomal protein S24
Coloring options: