IL_7QIZ_205
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- G(PSU)U*AAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_205 not in the Motif Atlas
- Geometric match to IL_2O3X_001
- Geometric discrepancy: 0.205
- The information below is about IL_2O3X_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7QIZ|1|S2|G|634
7QIZ|1|S2|PSU|635
7QIZ|1|S2|U|636
*
7QIZ|1|S2|A|969
7QIZ|1|S2|A|970
7QIZ|1|S2|U|971
Current chains
- Chain S2
- 18S
Nearby chains
- Chain CA
- 40S body ribosomal protein uS12
- Chain HA
- 30S ribosomal protein S15, chloroplastic
- Chain JA
- 40S ribosomal protein S15a-1
- Chain z
- Ribosomal_S17_N domain-containing protein
Coloring options: