IL_7QIZ_214
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- AGUCAG*CUUGGAUUU
- Length
- 15 nucleotides
- Bulged bases
- 7QIZ|1|S2|G|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_214 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.2062
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7QIZ|1|S2|A|897
7QIZ|1|S2|G|898
7QIZ|1|S2|U|899
7QIZ|1|S2|C|900
7QIZ|1|S2|A|901
7QIZ|1|S2|G|902
*
7QIZ|1|S2|C|913
7QIZ|1|S2|U|914
7QIZ|1|S2|U|915
7QIZ|1|S2|G|916
7QIZ|1|S2|G|917
7QIZ|1|S2|A|918
7QIZ|1|S2|U|919
7QIZ|1|S2|U|920
7QIZ|1|S2|U|921
Current chains
- Chain S2
- 18S
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain IA
- Ribosomal protein S14
- Chain v
- 40S ribosomal protein S3a
Coloring options: