IL_7QIZ_241
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GUA*U(PSU)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_241 not in the Motif Atlas
- Geometric match to IL_2ET8_001
- Geometric discrepancy: 0.2014
- The information below is about IL_2ET8_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7QIZ|1|S2|G|1482
7QIZ|1|S2|U|1483
7QIZ|1|S2|A|1484
*
7QIZ|1|S2|U|1534
7QIZ|1|S2|PSU|1535
7QIZ|1|S2|C|1536
Current chains
- Chain S2
- 18S
Nearby chains
- Chain OA
- Ribosomal_S7 domain-containing protein
- Chain RA
- 40S ribosomal protein uS9
- Chain TA
- 40S ribosomal protein uS13
- Chain UA
- 40S ribosomal protein eS19
- Chain ZA
- 40S ribosomal protein S25
Coloring options: