IL_7QIZ_255
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_255 not in the Motif Atlas
- Geometric match to IL_7RQB_075
- Geometric discrepancy: 0.1023
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
7QIZ|1|S2|C|1684
7QIZ|1|S2|G|1685
7QIZ|1|S2|G|1686
7QIZ|1|S2|A|1687
7QIZ|1|S2|U|1688
*
7QIZ|1|S2|A|1727
7QIZ|1|S2|G|1728
7QIZ|1|S2|A|1729
7QIZ|1|S2|A|1730
7QIZ|1|S2|G|1731
Current chains
- Chain S2
- 18S
Nearby chains
- Chain FA
- 40S ribosomal protein S6
- Chain Y
- TRASH domain-containing protein
- Chain y
- 40S ribosomal protein S8
Coloring options: