IL_7QP6_063
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_063 not in the Motif Atlas
- Geometric match to IL_1L9A_003
- Geometric discrepancy: 0.1806
- The information below is about IL_1L9A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70707.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 70
Unit IDs
7QP6|1|A|G|1270
7QP6|1|A|C|1271
7QP6|1|A|C|1272
*
7QP6|1|A|G|1510
7QP6|1|A|U|1511
7QP6|1|A|C|1512
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain a
- 40S ribosomal protein S10
- Chain b
- 40S ribosomal protein S15
- Chain i
- 40S ribosomal protein S29
- Chain k
- Ubiquitin-40S ribosomal protein S27a
Coloring options: