IL_7QP6_092
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UAUGGU*AACG
- Length
- 10 nucleotides
- Bulged bases
- 7QP6|1|A|G|113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_092 not in the Motif Atlas
- Homologous match to IL_8P9A_380
- Geometric discrepancy: 0.5244
- The information below is about IL_8P9A_380
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7QP6|1|A|U|110
7QP6|1|A|A|111
7QP6|1|A|U|112
7QP6|1|A|G|113
7QP6|1|A|G|114
7QP6|1|A|U|115
*
7QP6|1|A|A|348
7QP6|1|A|A|349
7QP6|1|A|C|350
7QP6|1|A|G|351
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S11
- Chain C
- 40S ribosomal protein S4, X isoform
- Chain R
- 40S ribosomal protein S8
Coloring options: