IL_7QP6_094
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAUAAC*GCUAAUA(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 7QP6|1|A|U|172
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_094 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.0984
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
7QP6|1|A|G|145
7QP6|1|A|G|146
7QP6|1|A|A|147
7QP6|1|A|U|148
7QP6|1|A|A|149
7QP6|1|A|A|150
7QP6|1|A|C|151
*
7QP6|1|A|G|167
7QP6|1|A|C|168
7QP6|1|A|U|169
7QP6|1|A|A|170
7QP6|1|A|A|171
7QP6|1|A|U|172
7QP6|1|A|A|173
7QP6|1|A|OMC|174
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
- Chain T
- 40S ribosomal protein S24
Coloring options: