IL_7QP7_102
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 7QP7|1|A|C|1331, 7QP7|1|A|U|1494, 7QP7|1|A|G|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP7_102 not in the Motif Atlas
- Homologous match to IL_8P9A_439
- Geometric discrepancy: 0.1151
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99893.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7QP7|1|A|U|1329
7QP7|1|A|G|1330
7QP7|1|A|C|1331
7QP7|1|A|A|1332
7QP7|1|A|U|1333
7QP7|1|A|G|1334
7QP7|1|A|G|1335
*
7QP7|1|A|U|1492
7QP7|1|A|C|1493
7QP7|1|A|U|1494
7QP7|1|A|G|1495
7QP7|1|A|U|1496
7QP7|1|A|G|1497
7QP7|1|A|A|1498
7QP7|1|A|U|1499
7QP7|1|A|G|1500
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 7
- mRNA
- Chain Z
- 40S ribosomal protein S3
- Chain a
- 40S ribosomal protein S10
- Chain h
- 40S ribosomal protein S20
- Chain i
- 40S ribosomal protein S29
- Chain q
- Eukaryotic translation initiation factor 1A, X-chromosomal
Coloring options: