IL_7QV1_129
3D structure
- PDB id
- 7QV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis collided disome (Leading 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUUAG*CGACGAUG
- Length
- 14 nucleotides
- Bulged bases
- 7QV1|1|a|U|252, 7QV1|1|a|C|288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QV1_129 not in the Motif Atlas
- Geometric match to IL_4V88_402
- Geometric discrepancy: 0.232
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
7QV1|1|a|C|250
7QV1|1|a|A|251
7QV1|1|a|U|252
7QV1|1|a|U|253
7QV1|1|a|A|254
7QV1|1|a|G|255
*
7QV1|1|a|C|285
7QV1|1|a|G|286
7QV1|1|a|A|287
7QV1|1|a|C|288
7QV1|1|a|G|289
7QV1|1|a|A|290
7QV1|1|a|U|291
7QV1|1|a|G|292
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: