IL_7QV1_139
3D structure
- PDB id
- 7QV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis collided disome (Leading 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7QV1|1|a|A|541, 7QV1|1|a|U|543, 7QV1|1|a|A|544
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QV1_139 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.2999
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7QV1|1|a|G|524
7QV1|1|a|U|525
7QV1|1|a|G|526
7QV1|1|a|C|527
7QV1|1|a|C|528
7QV1|1|a|A|529
7QV1|1|a|G|530
*
7QV1|1|a|C|537
7QV1|1|a|G|538
7QV1|1|a|G|539
7QV1|1|a|U|540
7QV1|1|a|A|541
7QV1|1|a|A|542
7QV1|1|a|U|543
7QV1|1|a|A|544
7QV1|1|a|C|545
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- mRNA
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
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