IL_7QV3_013

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_013 not in the Motif Atlas

Homologous match to IL_7A0S_006

Geometric discrepancy: 0.1079

The information below is about IL_7A0S_006

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_62167.3

Basepair signature

cWW-cWW-tSH-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7QV3|1|V|G|191
7QV3|1|V|G|192
7QV3|1|V|A|193
7QV3|1|V|A|194
7QV3|1|V|C|195
7QV3|1|V|U|196
7QV3|1|V|G|197
*
7QV3|1|V|C|204
7QV3|1|V|U|205
7QV3|1|V|A|206
7QV3|1|V|A|207
7QV3|1|V|G|208
7QV3|1|V|U|209
7QV3|1|V|A|210
7QV3|1|V|C|211

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain u

50S ribosomal protein L28