IL_7QV3_055

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GGAAG*CGC

Length

8 nucleotides

Bulged bases

7QV3|1|V|G|1371

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_055 not in the Motif Atlas

Homologous match to IL_4WF9_050

Geometric discrepancy: 0.2012

The information below is about IL_4WF9_050

Detailed Annotation

Major groove minor groove platform with tHH

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

7QV3|1|V|G|1358
7QV3|1|V|G|1359
7QV3|1|V|A|1360
7QV3|1|V|A|1361
7QV3|1|V|G|1362
*
7QV3|1|V|C|1370
7QV3|1|V|G|1371
7QV3|1|V|C|1372

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain I

Nascent chain

Chain S

50S ribosomal protein L22