IL_7QV3_073

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

ACUCGG*CUGU

Length

10 nucleotides

Bulged bases

7QV3|1|V|G|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_073 not in the Motif Atlas

Homologous match to IL_4WF9_065

Geometric discrepancy: 0.1832

The information below is about IL_4WF9_065

Detailed Annotation

Intercalated tWH

Broad Annotation

Intercalated tWH

Motif group

IL_28217.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

7QV3|1|V|A|1714
7QV3|1|V|C|1715
7QV3|1|V|U|1716
7QV3|1|V|C|1717
7QV3|1|V|G|1718
7QV3|1|V|G|1719
*
7QV3|1|V|C|2019
7QV3|1|V|U|2020
7QV3|1|V|G|2021
7QV3|1|V|U|2022

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14