IL_7QV3_096

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CCAC*GGG

Length

7 nucleotides

Bulged bases

7QV3|1|V|A|2232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_096 not in the Motif Atlas

Geometric match to IL_3TD0_005

Geometric discrepancy: 0.2642

The information below is about IL_3TD0_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

7QV3|1|V|C|2230
7QV3|1|V|C|2231
7QV3|1|V|A|2232
7QV3|1|V|C|2233
*
7QV3|1|V|G|2249
7QV3|1|V|G|2250
7QV3|1|V|G|2251

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain u

50S ribosomal protein L28