IL_7QV3_113

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGUAC*GGUAG

Length

10 nucleotides

Bulged bases

7QV3|1|V|U|2718, 7QV3|1|V|A|2719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_113 not in the Motif Atlas

Homologous match to IL_4WF9_102

Geometric discrepancy: 0.1372

The information below is about IL_4WF9_102

Detailed Annotation

UAA/GAN related, with intercalation

Broad Annotation

UAA/GAN related, with intercalation

Motif group

IL_82016.1

Basepair signature

cWW-L-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

7QV3|1|V|U|2716
7QV3|1|V|G|2717
7QV3|1|V|U|2718
7QV3|1|V|A|2719
7QV3|1|V|C|2720
*
7QV3|1|V|G|2747
7QV3|1|V|G|2748
7QV3|1|V|U|2749
7QV3|1|V|A|2750
7QV3|1|V|G|2751

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19