IL_7QV3_129

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7QV3|1|a|U|172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_129 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1704

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7QV3|1|a|G|146
7QV3|1|a|G|147
7QV3|1|a|A|148
7QV3|1|a|U|149
7QV3|1|a|A|150
7QV3|1|a|A|151
7QV3|1|a|C|152
*
7QV3|1|a|G|167
7QV3|1|a|C|168
7QV3|1|a|U|169
7QV3|1|a|A|170
7QV3|1|a|A|171
7QV3|1|a|U|172
7QV3|1|a|A|173
7QV3|1|a|C|174

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20