3D structure

PDB id
7QV3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.14 Å

Loop

Sequence
GGAAUU*AGGAAC
Length
12 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QV3_150 not in the Motif Atlas
Geometric match to IL_4LFB_030
Geometric discrepancy: 0.1429
The information below is about IL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

7QV3|1|a|G|682
7QV3|1|a|G|683
7QV3|1|a|A|684
7QV3|1|a|A|685
7QV3|1|a|U|686
7QV3|1|a|U|687
*
7QV3|1|a|A|721
7QV3|1|a|G|722
7QV3|1|a|G|723
7QV3|1|a|A|724
7QV3|1|a|A|725
7QV3|1|a|C|726

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain b
30S ribosomal protein S21
Chain f
30S ribosomal protein S6
Chain k
30S ribosomal protein S11
Chain r
30S ribosomal protein S18

Coloring options:


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