IL_7QV3_153

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CGAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_153 not in the Motif Atlas

Homologous match to IL_4LFB_033

Geometric discrepancy: 0.1184

The information below is about IL_4LFB_033

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_05821.1

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

17

Unit IDs

7QV3|1|a|C|788
7QV3|1|a|G|789
7QV3|1|a|A|790
7QV3|1|a|A|791
7QV3|1|a|C|792
*
7QV3|1|a|G|808
7QV3|1|a|G|809
7QV3|1|a|U|810
7QV3|1|a|A|811
7QV3|1|a|G|812

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain V

Large subunit ribosomal RNA; LSU rRNA

Chain b

30S ribosomal protein S21

Chain k

30S ribosomal protein S11