IL_7QV3_166

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GUUG*CACUC

Length

9 nucleotides

Bulged bases

7QV3|1|a|U|1136

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_166 not in the Motif Atlas

Homologous match to IL_6CZR_158

Geometric discrepancy: 0.2831

The information below is about IL_6CZR_158

Detailed Annotation

Minor groove platform

Broad Annotation

Minor groove platform

Motif group

IL_40144.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7QV3|1|a|G|1134
7QV3|1|a|U|1135
7QV3|1|a|U|1136
7QV3|1|a|G|1137
*
7QV3|1|a|C|1154
7QV3|1|a|A|1155
7QV3|1|a|C|1156
7QV3|1|a|U|1157
7QV3|1|a|C|1158

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10