IL_7QV3_173

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7QV3|1|a|C|1409, 7QV3|1|a|A|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_173 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.156

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7QV3|1|a|C|1408
7QV3|1|a|C|1409
7QV3|1|a|G|1410
*
7QV3|1|a|C|1511
7QV3|1|a|A|1512
7QV3|1|a|A|1513
7QV3|1|a|G|1514

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain A

mRNA

Chain H

Transfer RNA; tRNA

Chain e

30S ribosomal protein S5