IL_7QWQ_034

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GGUCC*GGC

Length

8 nucleotides

Bulged bases

7QWQ|1|5|C|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_034 not in the Motif Atlas

Geometric match to IL_4ZC7_002

Geometric discrepancy: 0.3005

The information below is about IL_4ZC7_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_43275.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

7QWQ|1|5|G|482
7QWQ|1|5|G|483
7QWQ|1|5|U|484
7QWQ|1|5|C|485
7QWQ|1|5|C|486
*
7QWQ|1|5|G|670
7QWQ|1|5|G|671
7QWQ|1|5|C|672

Current chains

Chain 5

28S rRNA

Nearby chains

Chain r

60S ribosomal protein L28